tophat

About

TopHat is a fast splice junction mapper for RNA-Seq reads. It aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions between exons.

Versions and Availability

Module Names for tophat on qb2
Machine Version Module Name
None Available N/A N/A
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Usage

Please refer to the items in the Resources section for detailed usage information.

Resources

Last modified: June 29 2015 16:07:05.