TopHat is a fast splice junction mapper for RNA-Seq reads. It aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions between exons.
Versions and Availability
Module Names for tophat on qb2
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Please refer to the items in the Resources section for detailed usage information.
Last modified: June 29 2015 16:07:05.