velvet

About

Velvet is a de novo genomic assembler specially designed for short read sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI), near Cambridge, in the United Kingdom. Velvet currently takes in short read sequences, removes errors then produces high quality unique contigs. It then uses paired-end read and long read information, when available, to retrieve the repeated areas between contigs.

Versions and Availability

Module Names for velvet on qb2
Machine Version Module Name
None Available N/A N/A
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Usage

Please refer to the links in the Resources section for detailed usage information.

Resources

Last modified: July 06 2015 14:34:42.